Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gm8856-201ENSMUST00000185254 1144 ntBASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcf11G3X9Z4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Gm14921-201ENSMUST00000118643 908 ntBASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Gm16505-201ENSMUST00000179981 232 ntBASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcf11G3X9Z4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Gm43068-201ENSMUST00000201095 1273 ntBASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Gm44262-201ENSMUST00000204969 372 ntBASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcf11G3X9Z4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcf11G3X9Z4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm23200-201ENSMUST00000104379 132 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm14017-201ENSMUST00000121934 386 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm16570-201ENSMUST00000161951 436 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm44405-201ENSMUST00000198952 126 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm3786-201ENSMUST00000202659 378 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm45691-201ENSMUST00000206905 1120 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms