Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim55G3X8Y1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim55G3X8Y1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gm27525-201ENSMUST00000184465 107 ntBASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim55G3X8Y1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim55G3X8Y1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm1401-201ENSMUST00000122048 772 ntBASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Mir5131-201ENSMUST00000175426 93 ntBASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Gm10060-201ENSMUST00000212002 111 ntBASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim55G3X8Y1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms