Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm14057-201ENSMUST00000120631 482 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Auts2-212ENSMUST00000178555 309 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm9522-201ENSMUST00000182394 926 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm38144-201ENSMUST00000192790 465 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh9F8VPK8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pcdh9F8VPK8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Pcdh9F8VPK8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm21854-201ENSMUST00000179901 471 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm10576-201ENSMUST00000191927 825 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh9F8VPK8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Gm29667-201ENSMUST00000190817 490 ntBASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Gm20445-201ENSMUST00000061905 565 ntBASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh9F8VPK8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms