Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm43692-201ENSMUST00000198236 1062 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm19994-201ENSMUST00000217086 586 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col22a1E9Q7P1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm18038-201ENSMUST00000197900 485 ntBASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Col22a1E9Q7P1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm14314-201ENSMUST00000118225 1015 ntBASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm15036-201ENSMUST00000118880 400 ntBASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm17831-201ENSMUST00000205579 900 ntBASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm25201-201ENSMUST00000083093 170 ntBASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Col22a1E9Q7P1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm14219-201ENSMUST00000120414 288 ntBASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm10731-201ENSMUST00000181171 448 ntBASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Gm45925-201ENSMUST00000218882 744 ntBASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col22a1E9Q7P1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms