Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm11222-201ENSMUST00000119005 738 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm12502-201ENSMUST00000120197 444 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm11964-201ENSMUST00000120982 444 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm14381-201ENSMUST00000122105 414 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm27320-201ENSMUST00000184892 109 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.89■□□□□ 0.13
Ube4aE9Q735 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.89■□□□□ 0.13
Ube4aE9Q735 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Gm10434-201ENSMUST00000101158 471 ntBASIC15.88■□□□□ 0.13
Ube4aE9Q735 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.88■□□□□ 0.13
Ube4aE9Q735 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.88■□□□□ 0.13
Ube4aE9Q735 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ube4aE9Q735 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Mir877-201ENSMUST00000104738 85 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm18056-201ENSMUST00000207670 568 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm18061-201ENSMUST00000208350 562 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm18063-201ENSMUST00000208529 568 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Gm18052-201ENSMUST00000208750 559 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.87■□□□□ 0.13
Ube4aE9Q735 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ube4aE9Q735 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms