Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm11500-201ENSMUST00000118237 601 ntBASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm13281-201ENSMUST00000120871 567 ntBASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm37782-201ENSMUST00000194879 678 ntBASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm42430-201ENSMUST00000197209 616 ntBASIC7.21□□□□□ -1.26
Herc1E9PZP8 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Herc1E9PZP8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cacna2d3-208ENSMUST00000225985 918 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm14999-201ENSMUST00000121039 624 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm25766-201ENSMUST00000104101 131 ntBASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Herc1E9PZP8 Gm14724-201ENSMUST00000118400 537 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gm18776-201ENSMUST00000188833 654 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC7.19□□□□□ -1.26
Herc1E9PZP8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gm45758-201ENSMUST00000212448 1006 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gm14451-201ENSMUST00000121581 1542 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Herc1E9PZP8 Ssr1-204ENSMUST00000225319 1610 ntBASIC7.19□□□□□ -1.26
Herc1E9PZP8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms