Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm37201-201ENSMUST00000191845 523 ntBASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm18893-201ENSMUST00000198416 943 ntBASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scaf11E9PZM7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm24845-201ENSMUST00000158034 109 ntBASIC18.24■□□□□ 0.51
Scaf11E9PZM7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm17391-201ENSMUST00000171036 126 ntBASIC18.24■□□□□ 0.51
Scaf11E9PZM7 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.24■□□□□ 0.51
Scaf11E9PZM7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Gm12029-201ENSMUST00000120073 832 ntBASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Gm6963-201ENSMUST00000147879 379 ntBASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 AC135669.1-202ENSMUST00000216742 540 ntBASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.23■□□□□ 0.51
Scaf11E9PZM7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scaf11E9PZM7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm13888-201ENSMUST00000119148 422 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm15432-201ENSMUST00000121106 195 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm11450-201ENSMUST00000121144 333 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scaf11E9PZM7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms