Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm13392-201ENSMUST00000117708 150 ntBASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Gm14660-201ENSMUST00000119809 575 ntBASIC17.98■□□□□ 0.47
Tmf1B9EKI3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Gm42693-201ENSMUST00000196779 631 ntBASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Gm43818-201ENSMUST00000200605 466 ntBASIC17.97■□□□□ 0.47
Tmf1B9EKI3 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmf1B9EKI3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm27731-201ENSMUST00000185192 107 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm28693-202ENSMUST00000190758 331 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm9257-201ENSMUST00000221254 232 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm10146-201ENSMUST00000072739 309 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm10478-201ENSMUST00000084451 396 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmf1B9EKI3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm17420-201ENSMUST00000164753 153 ntBASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm40466-201ENSMUST00000212174 422 ntBASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmf1B9EKI3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms