Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm5566-201ENSMUST00000116118 459 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm8410-201ENSMUST00000117225 605 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm7774-201ENSMUST00000200064 533 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm11127A7VMS2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22065-201ENSMUST00000103753 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22066-201ENSMUST00000103761 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24932-201ENSMUST00000103763 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24115-201ENSMUST00000103799 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22190-201ENSMUST00000103827 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22191-201ENSMUST00000103831 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24721-201ENSMUST00000103849 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm28018-201ENSMUST00000103869 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm26399-201ENSMUST00000103937 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25349-201ENSMUST00000177728 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm23616-201ENSMUST00000177797 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25871-201ENSMUST00000177816 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24752-201ENSMUST00000178240 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24496-201ENSMUST00000178287 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25649-201ENSMUST00000178476 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25548-201ENSMUST00000178681 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm23147-201ENSMUST00000178841 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm26095-201ENSMUST00000179270 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22171-201ENSMUST00000179283 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm23936-201ENSMUST00000179354 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm22619-201ENSMUST00000179516 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25255-201ENSMUST00000179579 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24755-201ENSMUST00000179691 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm26506-201ENSMUST00000179692 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm25086-201ENSMUST00000179931 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm23243-201ENSMUST00000180047 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24659-201ENSMUST00000180212 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm24169-201ENSMUST00000180244 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm23689-201ENSMUST00000180354 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm27359-201ENSMUST00000184153 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm27785-201ENSMUST00000184268 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm27466-201ENSMUST00000184396 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm27703-201ENSMUST00000184836 110 ntBASIC11.78□□□□□ -0.52
Gm11127A7VMS2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms