Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav12d-1A0N8R0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav12d-1A0N8R0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav12d-1A0N8R0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Mir449b-201ENSMUST00000104833 80 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav12d-1A0N8R0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms