Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc194A0A140LIT1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc194A0A140LIT1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc194A0A140LIT1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.23□□□□□ -0.29
Ccdc194A0A140LIT1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms