Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav3n-3A0A0G2JEM0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav3n-3A0A0G2JEM0 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms