Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Gm17795-201ENSMUST00000214505 757 ntBASIC10.92□□□□□ -0.66
Trav18A0A075B656 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.92□□□□□ -0.66
Trav18A0A075B656 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.91□□□□□ -0.66
Trav18A0A075B656 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.91□□□□□ -0.66
Trav18A0A075B656 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.91□□□□□ -0.66
Trav18A0A075B656 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav18A0A075B656 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.9□□□□□ -0.66
Trav18A0A075B656 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Mir874-201ENSMUST00000104769 76 ntBASIC10.9□□□□□ -0.66
Trav18A0A075B656 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav18A0A075B656 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms