Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H2afb2S4R1M3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm7488-201ENSMUST00000117148 684 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm2423-201ENSMUST00000074863 733 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H2afb2S4R1M3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gm13689-201ENSMUST00000119360 685 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.32□□□□□ -0.28
H2afb2S4R1M3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H2afb2S4R1M3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms