Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm15321-201ENSMUST00000121290 288 ntBASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd1Q9Z2E2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Gm11524-201ENSMUST00000119349 807 ntBASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd1Q9Z2E2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm22189-201ENSMUST00000103822 86 ntBASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Mir6977-201ENSMUST00000184960 64 ntBASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Mbd1Q9Z2E2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms