Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh17Q9R100 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh17Q9R100 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm27989-201ENSMUST00000184721 107 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm19078-201ENSMUST00000206311 727 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.99□□□□□ -0.33
Cdh17Q9R100 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cdh17Q9R100 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gm11524-201ENSMUST00000119349 807 ntBASIC12.98□□□□□ -0.33
Cdh17Q9R100 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gm27838-201ENSMUST00000184829 128 ntBASIC12.98□□□□□ -0.33
Cdh17Q9R100 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Gm9797-201ENSMUST00000052902 613 ntBASIC12.98□□□□□ -0.33
Cdh17Q9R100 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.98□□□□□ -0.33
Cdh17Q9R100 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh17Q9R100 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms