Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm11764-201ENSMUST00000120221 623 ntBASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm6550-201ENSMUST00000187574 993 ntBASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trem1Q9JKE2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm43347-201ENSMUST00000200226 580 ntBASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gm6376-201ENSMUST00000209407 580 ntBASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trem1Q9JKE2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms