Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm6912-201ENSMUST00000117218 544 ntBASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tubb3Q9ERD7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Mir698-201ENSMUST00000102164 109 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm11918-201ENSMUST00000121660 179 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tubb3Q9ERD7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms