Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rsph3bQ9DA80 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rsph3bQ9DA80 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Gm1335-201ENSMUST00000121653 386 ntBASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Gm4271-201ENSMUST00000174444 973 ntBASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rsph3bQ9DA80 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rsph3bQ9DA80 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms