Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm5354-201ENSMUST00000182417 973 ntBASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gtf3c6Q9D8P7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Gm15376-201ENSMUST00000122258 783 ntBASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gtf3c6Q9D8P7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms