Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.79■□□□□ 0.28
Chmp4bQ9D8B3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Gm26315-201ENSMUST00000083890 321 ntBASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp4bQ9D8B3 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Gm10576-201ENSMUST00000191927 825 ntBASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Gm19931-201ENSMUST00000198920 368 ntBASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Chmp4bQ9D8B3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chmp4bQ9D8B3 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Mir7654-201ENSMUST00000185082 70 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Gm37917-201ENSMUST00000194711 392 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Gm44397-201ENSMUST00000195950 113 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4bQ9D8B3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms