Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3bl1Q9D701 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Mir874-201ENSMUST00000104769 76 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm37714-201ENSMUST00000194742 342 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm5864-201ENSMUST00000202263 970 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Mir497b-201ENSMUST00000093601 125 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3bl1Q9D701 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3bl1Q9D701 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm11452-201ENSMUST00000122376 690 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Mir8098-201ENSMUST00000184011 137 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm29310-201ENSMUST00000185468 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21825-201ENSMUST00000185728 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm29109-201ENSMUST00000185895 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21896-201ENSMUST00000186520 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21873-201ENSMUST00000186728 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21794-201ENSMUST00000187056 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21880-201ENSMUST00000187275 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21826-201ENSMUST00000187451 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21198-201ENSMUST00000188393 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21749-201ENSMUST00000189343 696 ntBASIC12.14□□□□□ -0.47
Upk3bl1Q9D701 Gm21901-201ENSMUST00000189568 696 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms