Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Stag1Q9D3E6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Stag1Q9D3E6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm11637-201ENSMUST00000120601 592 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm16479-201ENSMUST00000121706 932 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm18935-201ENSMUST00000212692 664 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Stag1Q9D3E6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Stag1Q9D3E6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Gm11591-201ENSMUST00000120063 702 ntBASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Olfr284-202ENSMUST00000206647 966 ntBASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms