Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vps33aQ9D2N9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vps33aQ9D2N9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Mir5126-201ENSMUST00000175513 77 ntBASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Gm37714-201ENSMUST00000194742 342 ntBASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vps33aQ9D2N9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.07□□□□□ -0.16
Vps33aQ9D2N9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms