Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.34□□□□□ -0.27
Trim42Q9D2H5 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Mir125a-201ENSMUST00000083545 68 ntBASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim42Q9D2H5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim42Q9D2H5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm18057-201ENSMUST00000208220 503 ntBASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm5364-201ENSMUST00000216789 889 ntBASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim42Q9D2H5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim42Q9D2H5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms