Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm13365-201ENSMUST00000121188 973 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm8927-201ENSMUST00000181978 981 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm33320-201ENSMUST00000192232 530 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gm3222-201ENSMUST00000071282 990 ntBASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chaf1bQ9D0N7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm10175-201ENSMUST00000086013 645 ntBASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chaf1bQ9D0N7 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gm29541-201ENSMUST00000191351 678 ntBASIC12.49□□□□□ -0.41
Chaf1bQ9D0N7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms