Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm6736-201ENSMUST00000166583 948 ntBASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim13Q9CYB0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.31□□□□□ -0.44
Trim13Q9CYB0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim13Q9CYB0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm14822-201ENSMUST00000122247 291 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm9719-201ENSMUST00000162765 543 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm6916-202ENSMUST00000205523 195 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm5867-201ENSMUST00000063197 592 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.3□□□□□ -0.44
Trim13Q9CYB0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms