Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smc3Q9CW03 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.67■□□□□ 0.1
Smc3Q9CW03 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.67■□□□□ 0.1
Smc3Q9CW03 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
Smc3Q9CW03 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.66■□□□□ 0.1
Smc3Q9CW03 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gm45841-201ENSMUST00000207700 164 ntBASIC15.66■□□□□ 0.1
Smc3Q9CW03 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.66■□□□□ 0.1
Smc3Q9CW03 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.66■□□□□ 0.1
Smc3Q9CW03 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.66■□□□□ 0.1
Smc3Q9CW03 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smc3Q9CW03 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.65■□□□□ 0.1
Smc3Q9CW03 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms