Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 AC165260.4-201ENSMUST00000225924 724 ntBASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 CT025538.2-201ENSMUST00000226083 772 ntBASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Gm9899-201ENSMUST00000065519 555 ntBASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retreg3Q9CQV4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm13689-201ENSMUST00000119360 685 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm37631-201ENSMUST00000192275 364 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm43787-201ENSMUST00000197792 1037 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm18624-201ENSMUST00000220966 658 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retreg3Q9CQV4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gm1866-201ENSMUST00000120701 477 ntBASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Gm29608-201ENSMUST00000190444 463 ntBASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 AC132104.1-201ENSMUST00000213615 260 ntBASIC13.59□□□□□ -0.23
Retreg3Q9CQV4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms