Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AA543401-201ENSMUST00000164248 1269 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gm27459-201ENSMUST00000184860 107 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Thap2-203ENSMUST00000218989 527 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Birc2-201ENSMUST00000054878 378 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
RTRAFQ9CQE8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RTRAFQ9CQE8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RTRAFQ9CQE8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms