Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Rpl39lQ9CQD0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm19817-201ENSMUST00000199764 2132 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm18027-201ENSMUST00000218947 619 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm13722-201ENSMUST00000117964 3066 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 Gm43061-201ENSMUST00000198850 2241 ntBASIC8.64□□□□□ -1.03
Rpl39lQ9CQD0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Rpl39lQ9CQD0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms