Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim11Q99PQ2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gm5354-201ENSMUST00000182417 973 ntBASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim11Q99PQ2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Gm14057-201ENSMUST00000120631 482 ntBASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim11Q99PQ2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim11Q99PQ2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms