Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Gm27533-201ENSMUST00000183800 152 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Gm46209-201ENSMUST00000217912 553 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim8Q99PJ2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gm8410-201ENSMUST00000117225 605 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gm25948-201ENSMUST00000175334 112 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim8Q99PJ2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms