Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdh23Q99PF4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm23949-201ENSMUST00000104027 127 ntBASIC13.22□□□□□ -0.29
Cdh23Q99PF4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm42779-201ENSMUST00000198807 406 ntBASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm45550-201ENSMUST00000209380 946 ntBASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdh23Q99PF4 Gm13600-201ENSMUST00000117949 744 ntBASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Gm6963-201ENSMUST00000147879 379 ntBASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Gm38092-201ENSMUST00000195600 653 ntBASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh23Q99PF4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh23Q99PF4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm7541-201ENSMUST00000118361 535 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdh23Q99PF4 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Gzmn-202ENSMUST00000225535 989 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.2□□□□□ -0.3
Cdh23Q99PF4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms