Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gm16285-201ENSMUST00000162999 347 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 AC122924.1-201ENSMUST00000222044 163 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gm9575-201ENSMUST00000122140 1339 ntBASIC17.39■□□□□ 0.37
Rtn4Q99P72 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rtn4Q99P72 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm28766-201ENSMUST00000191086 234 ntBASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm19220-201ENSMUST00000222682 803 ntBASIC17.38■□□□□ 0.37
Rtn4Q99P72 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.38■□□□□ 0.37
Rtn4Q99P72 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Gm45885-202ENSMUST00000211520 1383 ntBASIC17.38■□□□□ 0.37
Rtn4Q99P72 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtn4Q99P72 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.37■□□□□ 0.37
Rtn4Q99P72 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm43433-201ENSMUST00000196573 481 ntBASIC17.37■□□□□ 0.37
Rtn4Q99P72 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm38368-201ENSMUST00000193181 1335 ntBASIC17.37■□□□□ 0.37
Rtn4Q99P72 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rtn4Q99P72 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms