Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mir698-201ENSMUST00000102164 109 ntBASIC13□□□□□ -0.33
Msh4Q99MT2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13□□□□□ -0.33
Msh4Q99MT2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Msh4Q99MT2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13□□□□□ -0.33
Msh4Q99MT2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Msh4Q99MT2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13□□□□□ -0.33
Msh4Q99MT2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13□□□□□ -0.33
Msh4Q99MT2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13□□□□□ -0.33
Msh4Q99MT2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13□□□□□ -0.33
Msh4Q99MT2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Msh4Q99MT2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Msh4Q99MT2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Msh4Q99MT2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.99□□□□□ -0.33
Msh4Q99MT2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.99□□□□□ -0.33
Msh4Q99MT2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.99□□□□□ -0.33
Msh4Q99MT2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.99□□□□□ -0.33
Msh4Q99MT2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm27772-201ENSMUST00000184900 187 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm18041-201ENSMUST00000218210 618 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Gm5186-201ENSMUST00000218781 920 ntBASIC12.98□□□□□ -0.33
Msh4Q99MT2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Msh4Q99MT2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms