Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Gm15487-201ENSMUST00000122373 465 ntBASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Gm24447-201ENSMUST00000083977 338 ntBASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cstf3Q99LI7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Cstf3Q99LI7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cstf3Q99LI7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cstf3Q99LI7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm15920-201ENSMUST00000118998 402 ntBASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm24694-201ENSMUST00000180054 110 ntBASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm27663-201ENSMUST00000184839 110 ntBASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm29667-201ENSMUST00000190817 490 ntBASIC12.89□□□□□ -0.35
Cstf3Q99LI7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cstf3Q99LI7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.88□□□□□ -0.35
Cstf3Q99LI7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms