Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha2Q91Y17 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.18□□□□□ -0.14
Pcdha2Q91Y17 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha2Q91Y17 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Mir874-201ENSMUST00000104769 76 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm37922-201ENSMUST00000195596 455 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm37497-201ENSMUST00000195830 798 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha2Q91Y17 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha2Q91Y17 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha2Q91Y17 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms