Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb1Q91Y08 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Mir6392-201ENSMUST00000184924 108 ntBASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm6983-201ENSMUST00000214912 628 ntBASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb1Q91Y08 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm44397-201ENSMUST00000195950 113 ntBASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm15823-201ENSMUST00000064305 670 ntBASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb1Q91Y08 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Pcdhb1Q91Y08 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb1Q91Y08 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhb1Q91Y08 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.83□□□□□ -0.19
Pcdhb1Q91Y08 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb1Q91Y08 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms