Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm11814-201ENSMUST00000119515 929 ntBASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb2Q91Y00 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Gm16372-201ENSMUST00000073088 450 ntBASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb2Q91Y00 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb2Q91Y00 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.15
Pcdhb2Q91Y00 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm5687-201ENSMUST00000118252 640 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb2Q91Y00 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb2Q91Y00 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms