Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm15371-201ENSMUST00000117057 784 ntBASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm38223-201ENSMUST00000194484 695 ntBASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm24447-201ENSMUST00000083977 338 ntBASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ddx41Q91VN6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gm44397-201ENSMUST00000195950 113 ntBASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gm7561-201ENSMUST00000211203 886 ntBASIC15.3■□□□□ 0.04
Ddx41Q91VN6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gm5161-201ENSMUST00000075243 853 ntBASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ddx41Q91VN6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Gm10012-201ENSMUST00000078252 192 ntBASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ddx41Q91VN6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ddx41Q91VN6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms