Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm5687-201ENSMUST00000118252 640 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm44882-201ENSMUST00000205702 802 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Acot6-202ENSMUST00000222921 3622 ntBASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb11Q91UZ8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb11Q91UZ8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Gm45841-201ENSMUST00000207700 164 ntBASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Gm18473-201ENSMUST00000220543 868 ntBASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb11Q91UZ8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms