Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm14644-201ENSMUST00000116671 647 ntBASIC15.44■□□□□ 0.06
StrcQ8VIM6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Gm12899-201ENSMUST00000120565 551 ntBASIC15.44■□□□□ 0.06
StrcQ8VIM6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Gm8492-201ENSMUST00000182375 987 ntBASIC15.44■□□□□ 0.06
StrcQ8VIM6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Ginm1-202ENSMUST00000065124 300 ntBASIC15.44■□□□□ 0.06
StrcQ8VIM6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
StrcQ8VIM6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm12795-201ENSMUST00000117594 539 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm15881-201ENSMUST00000148792 942 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm37246-201ENSMUST00000192665 835 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 Gm18038-201ENSMUST00000197900 485 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.43■□□□□ 0.06
StrcQ8VIM6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
StrcQ8VIM6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.42■□□□□ 0.06
StrcQ8VIM6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gm9996-201ENSMUST00000070359 913 ntBASIC15.42■□□□□ 0.06
StrcQ8VIM6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
StrcQ8VIM6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
StrcQ8VIM6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.41■□□□□ 0.06
StrcQ8VIM6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Gm9463-201ENSMUST00000206707 601 ntBASIC15.41■□□□□ 0.06
StrcQ8VIM6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.41■□□□□ 0.06
StrcQ8VIM6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
StrcQ8VIM6 Gm11989-201ENSMUST00000117240 672 ntBASIC15.4■□□□□ 0.06
StrcQ8VIM6 Gm11362-201ENSMUST00000118838 850 ntBASIC15.4■□□□□ 0.06
StrcQ8VIM6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms