Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trim60Q8VI40 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.8□□□□□ -0.2
Trim60Q8VI40 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.8□□□□□ -0.2
Trim60Q8VI40 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gm17795-201ENSMUST00000214505 757 ntBASIC13.8□□□□□ -0.2
Trim60Q8VI40 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim60Q8VI40 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.79□□□□□ -0.2
Trim60Q8VI40 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.79□□□□□ -0.2
Trim60Q8VI40 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim60Q8VI40 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm4875-201ENSMUST00000118257 786 ntBASIC13.78□□□□□ -0.2
Trim60Q8VI40 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim60Q8VI40 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim60Q8VI40 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.78□□□□□ -0.2
Trim60Q8VI40 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms