Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Gm22323-201ENSMUST00000103832 109 ntBASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Gm24548-201ENSMUST00000158650 108 ntBASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp7Q8R1T1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp7Q8R1T1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp7Q8R1T1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp7Q8R1T1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp7Q8R1T1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.94■□□□□ 0.3
Chmp7Q8R1T1 Gm20482-202ENSMUST00000174729 825 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms