Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm15806-201ENSMUST00000120696 955 ntBASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm9002-201ENSMUST00000178437 499 ntBASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sf3a1Q8K4Z5 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm7287-201ENSMUST00000205267 602 ntBASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm18473-201ENSMUST00000220543 868 ntBASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Itm2b-204ENSMUST00000228637 783 ntBASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sf3a1Q8K4Z5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sf3a1Q8K4Z5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Gm6152-201ENSMUST00000151704 340 ntBASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Gm6244-201ENSMUST00000178732 841 ntBASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sf3a1Q8K4Z5 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms