Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx54Q8K4L0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Gm12266-201ENSMUST00000120311 962 ntBASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Gm7848-201ENSMUST00000210739 718 ntBASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 AC159819.2-201ENSMUST00000216151 342 ntBASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.3■□□□□ 0.36
Ddx54Q8K4L0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm13296-201ENSMUST00000117854 997 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm6407-201ENSMUST00000176468 549 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm18730-201ENSMUST00000218038 343 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm22058-201ENSMUST00000083393 310 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ddx54Q8K4L0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Daam2-202ENSMUST00000224595 1926 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm5732-201ENSMUST00000182596 1007 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Mir6958-201ENSMUST00000184207 73 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 AC125486.1-201ENSMUST00000218701 320 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Gzmn-202ENSMUST00000225535 989 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.28■□□□□ 0.36
Ddx54Q8K4L0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms