Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CopaQ8CIE6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm19078-201ENSMUST00000206311 727 ntBASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.62□□□□□ -0.23
CopaQ8CIE6 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopaQ8CIE6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Mir7085-201ENSMUST00000184353 66 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm6266-201ENSMUST00000203844 806 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm44719-201ENSMUST00000206404 149 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Mir497b-201ENSMUST00000093601 125 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.61□□□□□ -0.23
CopaQ8CIE6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CopaQ8CIE6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.6□□□□□ -0.23
CopaQ8CIE6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms