Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ShfQ8CG80 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.9□□□□□ -0.5
ShfQ8CG80 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ShfQ8CG80 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ShfQ8CG80 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
ShfQ8CG80 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm14701-201ENSMUST00000117156 348 ntBASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm13223-201ENSMUST00000118609 747 ntBASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ShfQ8CG80 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ShfQ8CG80 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm23935-201ENSMUST00000102303 57 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm24270-201ENSMUST00000102326 57 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm12485-201ENSMUST00000119641 291 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm24245-201ENSMUST00000157318 57 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ShfQ8CG80 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.88□□□□□ -0.51
ShfQ8CG80 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
ShfQ8CG80 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ShfQ8CG80 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ShfQ8CG80 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.87□□□□□ -0.51
ShfQ8CG80 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ShfQ8CG80 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms