Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Gm44771-201ENSMUST00000206975 626 ntBASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28aQ8CEI3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gm5312-201ENSMUST00000203728 547 ntBASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28aQ8CEI3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28aQ8CEI3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms